SNP Profiles of TSH 516   View Data

 Show/Hide Profiles

 Key

 1234567891011121314
_Input profile
CGATACGGACCGAACTAAAGAGACCTGT
1._TSH_516
CGATACGGACCGAACTAAAGAGACCTGT
2._GC-08-209-6-05
CGATACGGACCGAACTAAAGAGACCTGT
3._GC-08-209-6-05
CGATACGGACCGAACTAAAGAGACCTGT
4._GC-08-209-6-05
CGATACGGACCGAACTAAAGAGACCTGT
5._GC-08-209-6-05
CGATACGGACCGAACTAAAGAGACCTGT
6._GC-08-209-6-05
CGATACGGACCGAACTAAAGAGACCTGT
7._GC-08-209-6-05
CGATACGGACCGAACTAAAGAGACCTGT
8._GC-08-208-6-04
CGATACGGACCGAACTAAAGAGACCTGT
9._GC-08-208-6-04
CGATACGGACCGAACTAAAGAGACCTGT
10._GC-08-208-6-04
CGATACGGACCGAACTAAAGAGACCTGT
11._GC-08-208-6-04
CGATACGGACCGAACTAAAGAGACCTGT
12._GC-08-208-6-04
CGATACGGACCGAACTAAAGAGACCTGT
13._GC-08-208-6-04
CGATACGGACCGAACTAAAGAGACCTGT
14._TSH_516
CGATACGGACCGAACTAAAGAGACCTGT
15._TSH_516
CGATACGGACCGAACTAAAGAGACCTGT
16._TSH_516
CGATACGGACCGAACTAAAGAGACCTGT
17._TSH_516
CGATACGGACCGAACTAAAGAGACCTGT
18._TSH_516
CGATACGGACCGAACTAAAGAGACCTGT
19._TSH_516
CGATACGGACCGAACTAAAGAGACCTGT
20._TSH_516
CGATACGGACCGAACTAAAGAGACCTGT
21._TSH_516
CGATACGGACCGAACTAAAGAGACCTGT
22._TSH_516
CGATACGGACCGAACTAAAGAGACCTGT
23._TSH_516
CGATACGGACCGAACTAAAGAGACCTGT
24._TSH_516
CGATACGGACCGAACTAAAGAGACCTGT
25._GC-08-209-6-05
CGATACGGACCGAACTAAAGAGACCTGT
26._RUQ_1018
CGATACGGACCGAACTAAAGAGACCTGT
27._GC-08-208-6-04
CGATACGGACCGAACTAAAGAGACCTGT
28._TSH_516
CGATACGGACCGAACTAAAGAGACCTGT
29._RUQ_1018
__ACGGACCGAACTAA_AGACCTGT
30._RUQ_1018
__AC___AA____AA__
31._GC-08-209-6-05
CGATACGTACCCAGCCAAAAAGAACCGG
32._TSH_516
CGATACGTACCCAGCCAAAAAGAACCGG
33._RUQ_1018
CGATACCCACCGAAAGAAAG_AC_AC
 1516171819202122232425262728
_Input profile
CGTTGTCGCTCGATCTAGCTAGATCTCT
1._TSH_516
CGTTGTCGCTCGATCTAGCTAGATCTCT
2._GC-08-209-6-05
CGTTGTCGCTCGATCTAGCTAGATCTCT
3._GC-08-209-6-05
CGTTGTCGCTCGATCTAGCTAGATCTCT
4._GC-08-209-6-05
CGTTGTCGCTCGATCTAGCTAGATCTCT
5._GC-08-209-6-05
CGTTGTCGCTCGATCTAGCTAGATCTCT
6._GC-08-209-6-05
CGTTGTCGCTCGATCTAGCTAGATCTCT
7._GC-08-209-6-05
CGTTGTCGCTCGATCTAGCTAGATCTCT
8._GC-08-208-6-04
CGTTGTCGCTCGATCTAGCTAGATCTCT
9._GC-08-208-6-04
CGTTGTCGCTCGATCTAGCTAGATCTCT
10._GC-08-208-6-04
CGTTGTCGCTCGATCTAGCTAGATCTCT
11._GC-08-208-6-04
CGTTGTCGCTCGATCTAGCTAGATCTCT
12._GC-08-208-6-04
CGTTGTCGCTCGATCTAGCTAGATCTCT
13._GC-08-208-6-04
CGTTGTCGCTCGATCTAGCTAGATCTCT
14._TSH_516
CGTTGTCGCTCGATCTAGCTAGATCTCT
15._TSH_516
CGTTGTCGCTCGATCTAGCTAGATCTCT
16._TSH_516
CGTTGTCGCTCGATCTAGCTAGATCTCT
17._TSH_516
CGTTGTCGCTCGATCTAGCTAGATCTCT
18._TSH_516
CGTTGTCGCTCGATCTAGCTAGATCTCT
19._TSH_516
CGTTGTCGCTCGATCTAGCTAGATCTCT
20._TSH_516
CGTTGTCGCTCGATCTAGCTAGATCTCT
21._TSH_516
CGTTGTCGCTCGATCTAGCTAGATCTCT
22._TSH_516
CGTTGTCGCTCGATCTAGCTAGATCTCT
23._TSH_516
CGTTGTCGCTCGATCTAGCTAGATCTCT
24._TSH_516
CGTTGTCGCTCGATCTAGCTAGATCTCT
25._GC-08-209-6-05
CGTTGTCGCTCGATCTAGCTAGATCTCT
26._RUQ_1018
CGTTGTCGCTCGATCTAGCTAGATCTCT
27._GC-08-208-6-04
CG_GTCGCTCGATCTAGCTAGATCTCT
28._TSH_516
CG_GTCGCTCGATCTAGCTAGATCTCT
29._RUQ_1018
GGTTGTCG____AGCT____
30._RUQ_1018
CG_GTCG____AG_AG_CT_
31._GC-08-209-6-05
CCTTGTCGCTCGATCTAGCTAGAACTCT
32._TSH_516
CCTTGTCGCTCGATCTAGCTAGAACTCT
33._RUQ_1018
CGAAACCGAGCGATAGAGAGAGAT__
 2930313233343536      
_Input profile
GTCTACCTCTCGAGCTX_XX_XX_XX_XX_XX_X
1._TSH_516
GTCTACCTCTCGAGCTX_XX_XX_XX_XX_XX_X
2._GC-08-209-6-05
GTCTACCTCTCGAGCTX_XX_XX_XX_XX_XX_X
3._GC-08-209-6-05
GTCTACCTCTCGAGCTX_XX_XX_XX_XX_XX_X
4._GC-08-209-6-05
GTCTACCTCTCGAGCTX_XX_XX_XX_XX_XX_X
5._GC-08-209-6-05
GTCTACCTCTCGAGCTX_XX_XX_XX_XX_XX_X
6._GC-08-209-6-05
GTCTACCTCTCGAGCTX_XX_XX_XX_XX_XX_X
7._GC-08-209-6-05
GTCTACCTCTCGAGCTX_XX_XX_XX_XX_XX_X
8._GC-08-208-6-04
GTCTACCTCTCGAGCTX_XX_XX_XX_XX_XX_X
9._GC-08-208-6-04
GTCTACCTCTCGAGCTX_XX_XX_XX_XX_XX_X
10._GC-08-208-6-04
GTCTACCTCTCGAGCTX_XX_XX_XX_XX_XX_X
11._GC-08-208-6-04
GTCTACCTCTCGAGCTX_XX_XX_XX_XX_XX_X
12._GC-08-208-6-04
GTCTACCTCTCGAGCTX_XX_XX_XX_XX_XX_X
13._GC-08-208-6-04
GTCTACCTCTCGAGCTX_XX_XX_XX_XX_XX_X
14._TSH_516
GTCTACCTCTCGAGCTX_XX_XX_XX_XX_XX_X
15._TSH_516
GTCTACCTCTCGAGCTX_XX_XX_XX_XX_XX_X
16._TSH_516
GTCTACCTCTCGAGCTX_XX_XX_XX_XX_XX_X
17._TSH_516
GTCTACCTCTCGAGCTX_XX_XX_XX_XX_XX_X
18._TSH_516
GTCTACCTCTCGAGCTX_XX_XX_XX_XX_XX_X
19._TSH_516
GTCTACCTCTCGAGCTX_XX_XX_XX_XX_XX_X
20._TSH_516
GTCTACCTCTCGAGCTX_XX_XX_XX_XX_XX_X
21._TSH_516
GTCTACCTCTCGAGCTX_XX_XX_XX_XX_XX_X
22._TSH_516
GTCTACCTCTCGAGCTX_XX_XX_XX_XX_XX_X
23._TSH_516
GTCTACCTCTCGAGCTX_XX_XX_XX_XX_XX_X
24._TSH_516
GTCTACCTCTCGAGCTX_XX_XX_XX_XX_XX_X
25._GC-08-209-6-05
GTCTACCTCTCGAGCTX_XX_XX_XX_XX_XX_X
26._RUQ_1018
GTCTACCTCTCGAGCTX_XX_XX_XX_XX_XX_X
27._GC-08-208-6-04
GTCTACCTCTCGAGCTX_XX_XX_XX_XX_XX_X
28._TSH_516
GTCTACCTCTCGAGCTX_XX_XX_XX_XX_XX_X
29._RUQ_1018
GT___CTCGAG_X_XX_XX_XX_XX_XX_X
30._RUQ_1018
GT____CG__X_XX_XX_XX_XX_XX_X
31._GC-08-209-6-05
GTCCACCTCCCGAGCTX_XX_XX_XX_XX_XX_X
32._TSH_516
GTCCACCTCCCGAGCTX_XX_XX_XX_XX_XX_X
33._RUQ_1018
ACAGACAGAGCGAGAGX_XX_XX_XX_XX_XX_X

Input profile: TSH_516

 
 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8604 7
 Dapeng Zhang, 2016

1._TSH_516

identical
36 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8605 9
 Dapeng Zhang, 2016

2._TSH_516 GC-08-209-6-05

identical
36 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

3._TSH_516 GC-08-209-6-05

identical
36 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

4._TSH_516 GC-08-209-6-05

identical
36 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6
 Mars, 2018

5._TSH_516 GC-08-209-6-05

identical
36 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

6._TSH_516 GC-08-209-6-05

identical
36 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

7._TSH_516 GC-08-209-6-05

identical
36 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

8._TSH_516 GC-08-208-6-04

identical
36 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

9._TSH_516 GC-08-208-6-04

identical
36 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8
 Mars, 2018

10._TSH_516 GC-08-208-6-04

identical
36 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 7
Notes: 7
 Mars, 2018

11._TSH_516 GC-08-208-6-04

identical
36 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3 > FP1
 Mars, 2018

12._TSH_516 GC-08-208-6-04

identical
36 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

13._TSH_516 GC-08-208-6-04

identical
36 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

14._TSH_516

identical
36 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8605 10
 Dapeng Zhang, 2016

15._TSH_516

identical
36 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8605 7
 Dapeng Zhang, 2016

16._TSH_516

identical
36 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8605 6
 Dapeng Zhang, 2016

17._TSH_516

identical
36 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8605 3
 Dapeng Zhang, 2016

18._TSH_516

identical
36 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8605 2
 Dapeng Zhang, 2016

19._TSH_516

identical
36 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8605 1
 Dapeng Zhang, 2016

20._TSH_516

identical
36 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8604 3 > FP
 Dapeng Zhang, 2016

21._TSH_516

identical
36 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8604 9
 Dapeng Zhang, 2016

22._TSH_516

identical
36 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8604 8
 Dapeng Zhang, 2016

23._TSH_516

identical
36 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8604 2
 Dapeng Zhang, 2016

24._TSH_516

identical
36 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8604 1
 Dapeng Zhang, 2016
Population Assignment: 
View Data
 Dapeng Zhang, 2016

25._TSH_516 GC-08-209-6-05

identical
36 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10
 Mars, 2018

26._TSH_516 RUQ_1018

identical
36 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2016

27._TSH_516 GC-08-208-6-04

identical
35 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4 > FP2
 Mars, 2018

28._TSH_516

identical
35 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8604 4 > FP
 Dapeng Zhang, 2016

29._TSH_516 RUQ_1018

97.6 %
21 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

30._TSH_516 RUQ_1018

95.5 %
11 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023

31._TSH_516 GC-08-209-6-05

83.3 %
36 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

32._TSH_516

83.3 %
36 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8605 5
 Dapeng Zhang, 2016

33._TSH_516 RUQ_1018

59.4 %
32 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

 

  Key to SNP Markers

1TcSNP25 2TcSNP32 3TcSNP144 4TcSNP150 5TcSNP193
6TcSNP226 7TcSNP230 8TcSNP242 9TcSNP372 10TcSNP429
11TcSNP469 12TcSNP529 13TcSNP534 14TcSNP560 15TcSNP577
16TcSNP619 17TcSNP723 18TcSNP872 19TcSNP917 20TcSNP929
21TcSNP953 22TcSNP994 23TcSNP998 24TcSNP1060 25TcSNP1062
26TcSNP1075 27TcSNP1144 28TcSNP1165 29TcSNP1253 30TcSNP1270
31TcSNP1350 32TcSNP1414 33TcSNP1442 34TcSNP1458 35TcSNP1484
36TcSNP1520